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2023 Volume 14 Issue 1

Molecular Identification of Ascomycota Fungi Using Its Region as DNA Barcodes


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Abstract

We studied the material collected from agricultural land. Four Ascomycota fungi were isolated from the soil sample. The preliminary identification based on morphological characters using taxonomic keys was done only up to the genus level, due to overlapping characters, making identification difficult. Therefore the Internal transcribed spacer (ITS) region also called as fungal DNA barcode was sequenced. The obtained results were compared with GenBank, the NCBI database, and identification was made up to species level based on the similarity search result. The phylogenetic relationship among the species and between species was studied using a neighbor-joining tree. The genetic distance between the study fungi was computed through the maximum composite likelihood model. These sequences were deposited in GenBank, NCBI, and accession numbers were allotted by GenBank to the submitted sequences. Based on the morphological characters and the DNA sequence analysis results, the isolated fungus was identified as Aspergillus terrus and Aspergillus flavus.


How to cite this article
Vancouver
Chinnasamy S, Nariyampet SA, Hajamohideen AJA, Zeeshan M, Dawlath W, Pakir AWM, et al. Molecular Identification of Ascomycota Fungi Using Its Region as DNA Barcodes. J Biochem Technol. 2023;14(1):45-9. https://doi.org/10.51847/G3KFX7gJOs
APA
Chinnasamy, S., Nariyampet, S. A., Hajamohideen, A. J. A., Zeeshan, M., Dawlath, W., Pakir, A. W. M., & Afreen, S. (2023). Molecular Identification of Ascomycota Fungi Using Its Region as DNA Barcodes. Journal of Biochemical Technology, 14(1), 45-49. https://doi.org/10.51847/G3KFX7gJOs
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JOURNAL OF BIOCHEMICAL TECHNOLOGY
JOURNAL OF BIOCHEMICAL TECHNOLOGY
Journal of Biochemical Technology is a double-blind peer reviewed International Journal published by the Deniz Publication on behalf of the Biochemical Technology Society, a Registered Charity Organization from India

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AREA OF INTEREST
new advances in enzymatic and protein mechanims; applied molecular genetics and biotechnology; genomics and proteomics; metabolic; medical, environmental, food and agro biotechnology.

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This journal provides immediate open access to its content on the principle that making research freely available to the public supports a greater global exchange of knowledge. Keywords include, Biochemical Research: Endo/exocytosis, Trafficking, Membrane Biology, Cell Migration, Cell-Matrix Organelle Biogenesis, Cytoskeleton Proteolysis, Cell Death, Cell Cycle, Cancer, Cell Growth/Death, Differentiation, Drug Targets, Gene Therapy, Models of Disease, Proteomics, Stem Cells, Bioenergetics, Mitochondria, Free Radicals, Redox Signaling, Ion Transport/Channels, Oxidative